PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009759672.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 221aa    MW: 25444.4 Da    PI: 7.6032
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009759672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1894145155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ykGVr+++ +g+++AeIrdp     k +r +lg++ t+e+Aa a+++ + kl+g
  XP_009759672.1  94 KKYKGVRRRP-WGKYAAEIRDP---ErKGARLWLGTYETPEDAALAYDRTAFKLRG 145
                     59********.**********7...3235*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.33E-3394155No hitNo description
SuperFamilySSF541715.75E-2395154IPR016177DNA-binding domain
PfamPF008474.0E-1395145IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.6E-3195154IPR001471AP2/ERF domain
SMARTSM003801.0E-3695159IPR001471AP2/ERF domain
PROSITE profilePS5103224.09295153IPR001471AP2/ERF domain
PRINTSPR003671.6E-996107IPR001471AP2/ERF domain
PRINTSPR003671.6E-9119135IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MQGISLEFDQ QNFLDTMQHL FNDPDFPQIF SELNSFNNTI QTPRNPGSEN TIFAQNMVQR  60
NQEKYADDHI VPLQKTSSEN DKEPSSDQVP LEKKKYKGVR RRPWGKYAAE IRDPERKGAR  120
LWLGTYETPE DAALAYDRTA FKLRGSRAVL NFPHLIESNV TEINRVRPRR RSRSPDIELS  180
SDQNDGPISK RRNVDLINSL ATANLDSQII VERCLTSSFF A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2994158468ATERF1
3gcc_A2e-2994158468ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009759672.11e-164PREDICTED: ethylene-responsive transcription factor 13-like
SwissprotQ8L9K14e-41ERF99_ARATH; Ethylene-responsive transcription factor 13
TrEMBLM1CGJ52e-75M1CGJ5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000670136e-75(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-36ethylene-responsive element binding factor 13